Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 RNU1-129P-201ENST00000384064 167 ntBASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AL645939.2-201ENST00000427340 991 ntBASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 U1.21-201ENST00000580816 167 ntBASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AL031055.1-201ENST00000606362 631 ntBASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AC023141.5-201ENST00000458585 616 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AC004449.1-201ENST00000564240 433 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AC027796.2-201ENST00000575326 344 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AC027612.4-201ENST00000605371 583 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 SLC22A20-204ENST00000530038 1673 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AC007326.2-201ENST00000624224 7579 ntBASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH3KBP1Q96B97 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AL645728.1-201ENST00000366221 2101 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 AC006277.1-201ENST00000624348 1610 ntBASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.28■□□□□ 0.2
SH3KBP1Q96B97 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms