Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 AC024909.3-201ENST00000611513 2257 ntBASIC17.63■□□□□ 0.41
SEMA4DQ92854 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.62■□□□□ 0.41
SEMA4DQ92854 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AC142381.1-201ENST00000426099 345 ntBASIC17.62■□□□□ 0.41
SEMA4DQ92854 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AC092865.5-201ENST00000545435 363 ntBASIC17.62■□□□□ 0.41
SEMA4DQ92854 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 AC008267.7-201ENST00000624570 1194 ntBASIC17.62■□□□□ 0.41
SEMA4DQ92854 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEMA4DQ92854 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SEMA4DQ92854 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 AC008741.2-201ENST00000612792 3115 ntBASIC17.61■□□□□ 0.41
SEMA4DQ92854 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 MIR346-201ENST00000362234 95 ntBASIC17.61■□□□□ 0.41
SEMA4DQ92854 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 AL603832.2-201ENST00000566195 2125 ntBASIC17.61■□□□□ 0.41
SEMA4DQ92854 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 AC022145.2-201ENST00000598203 171 ntBASIC17.61■□□□□ 0.41
SEMA4DQ92854 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEMA4DQ92854 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SEMA4DQ92854 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms