Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 TERC-201ENST00000602385 541 ntBASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AC138894.3-201ENST00000603787 634 ntBASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AL353135.1-201ENST00000606729 504 ntBASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AL022326.1-202ENST00000641533 845 ntBASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIML2Q8N7C3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AL590787.1-201ENST00000568856 1315 ntBASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AC006538.1-201ENST00000567905 1585 ntBASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AC097376.2-205ENST00000610159 5334 ntBASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 RBM17P3-201ENST00000417687 1192 ntBASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AL139288.1-201ENST00000623748 933 ntBASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AL139011.1-202ENST00000642063 584 ntBASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIML2Q8N7C3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIML2Q8N7C3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIML2Q8N7C3 AC132008.2-207ENST00000454517 770 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms