Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 AC055876.2-201ENST00000531834 546 ntBASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 HILS1-202ENST00000545329 423 ntBASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 SLC7A15P-201ENST00000424028 1363 ntBASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 KRT8P12-202ENST00000472924 1397 ntBASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 SDHAP3-202ENST00000515467 728 ntBASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 AC099568.2-201ENST00000609194 695 ntBASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 MIR6805-201ENST00000615055 62 ntBASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPOQ8N3V7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AL512361.1-201ENST00000554200 418 ntBASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AC008494.3-201ENST00000606615 944 ntBASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 MIR6799-201ENST00000620297 69 ntBASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AL033527.5-202ENST00000641632 1098 ntBASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AL139011.1-202ENST00000642063 584 ntBASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.6■□□□□ 0.25
SYNPOQ8N3V7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms