Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 AL589739.1-201ENST00000607720 493 ntBASIC16.65■□□□□ 0.26
PGBD3Q8N328 AC025048.6-201ENST00000634326 1161 ntBASIC16.65■□□□□ 0.26
PGBD3Q8N328 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 TUBB8P12-201ENST00000308911 1335 ntBASIC16.65■□□□□ 0.26
PGBD3Q8N328 TUBB7P-202ENST00000428444 1305 ntBASIC16.65■□□□□ 0.26
PGBD3Q8N328 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 TUBB8P7-204ENST00000567960 1332 ntBASIC16.65■□□□□ 0.26
PGBD3Q8N328 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.64■□□□□ 0.26
PGBD3Q8N328 AL035456.1-201ENST00000456064 1369 ntBASIC16.64■□□□□ 0.26
PGBD3Q8N328 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 CETN4P-206ENST00000642099 2168 ntBASIC16.64■□□□□ 0.25
PGBD3Q8N328 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 TSSK5P-201ENST00000423978 907 ntBASIC16.64■□□□□ 0.25
PGBD3Q8N328 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 RN7SL692P-201ENST00000464677 288 ntBASIC16.64■□□□□ 0.25
PGBD3Q8N328 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 HLA-V-204ENST00000476601 1289 ntBASIC16.64■□□□□ 0.25
PGBD3Q8N328 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.64■□□□□ 0.25
PGBD3Q8N328 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PGBD3Q8N328 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PGBD3Q8N328 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD3Q8N328 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD3Q8N328 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms