Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 GGT3P-204ENST00000453783 1664 ntBASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
NPAS4Q8IUM7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 AC104596.2-201ENST00000512793 793 ntBASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 AL512343.1-201ENST00000605837 169 ntBASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 MIR8072-201ENST00000614241 80 ntBASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 MIR6799-201ENST00000620297 69 ntBASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS4Q8IUM7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TMEM14DP-201ENST00000422205 345 ntBASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 AL033527.5-201ENST00000641382 801 ntBASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
NPAS4Q8IUM7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms