Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 AC022210.1-201ENST00000449856 793 ntBASIC17.4■□□□□ 0.38
RNF135Q8IUD6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 RARRES2P9-201ENST00000565168 469 ntBASIC17.4■□□□□ 0.38
RNF135Q8IUD6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF135Q8IUD6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.39■□□□□ 0.38
RNF135Q8IUD6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF135Q8IUD6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF135Q8IUD6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 MIR4525-201ENST00000580000 75 ntBASIC17.39■□□□□ 0.37
RNF135Q8IUD6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 AC084018.2-201ENST00000613093 2607 ntBASIC17.39■□□□□ 0.37
RNF135Q8IUD6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF135Q8IUD6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AL138918.1-201ENST00000568306 659 ntBASIC17.38■□□□□ 0.37
RNF135Q8IUD6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 AC011676.5-201ENST00000624864 2660 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms