Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 AL138918.1-201ENST00000568306 659 ntBASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 AL512652.2-201ENST00000625156 1716 ntBASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.15■□□□□ 0.34
RFWD3Q6PCD5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RFWD3Q6PCD5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 TSEN15P1-201ENST00000423257 515 ntBASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 FAM58DP-201ENST00000428076 619 ntBASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC023141.5-201ENST00000458585 616 ntBASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 LINC01225-203ENST00000563550 1244 ntBASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AL662844.4-201ENST00000606367 2838 ntBASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFWD3Q6PCD5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 OR6D1P-203ENST00000641209 4860 ntBASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 UXT-AS1-201ENST00000590504 1525 ntBASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 IGHV3-62-201ENST00000520057 340 ntBASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC093028.1-201ENST00000622998 982 ntBASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms