Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC008894.3-201ENST00000624324 3103 ntBASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC092364.2-201ENST00000596710 2692 ntBASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 TIMM8BP1-201ENST00000452384 211 ntBASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 KRT18P34-201ENST00000488218 1270 ntBASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC39BQ5VTQ0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 AC016027.1-202ENST00000607927 1699 ntBASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 AC022188.1-201ENST00000620960 1664 ntBASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 RPS8P6-201ENST00000426177 609 ntBASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms