Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF220Q5VTB9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF220Q5VTB9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 SIGLEC16-201ENST00000599858 1437 ntBASIC15.88■□□□□ 0.13
RNF220Q5VTB9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 SPDYE21P-201ENST00000413323 827 ntBASIC15.88■□□□□ 0.13
RNF220Q5VTB9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 AL020989.1-201ENST00000422979 469 ntBASIC15.88■□□□□ 0.13
RNF220Q5VTB9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF220Q5VTB9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms