Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 LINC01451-201ENST00000623792 534 ntBASIC14.01□□□□□ -0.17
LRRK2Q5S007 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 AHCYP2-201ENST00000430630 1300 ntBASIC14□□□□□ -0.17
LRRK2Q5S007 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14□□□□□ -0.17
LRRK2Q5S007 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 VDAC1P7-201ENST00000462417 847 ntBASIC14□□□□□ -0.17
LRRK2Q5S007 SERPINA13P-202ENST00000478994 924 ntBASIC14□□□□□ -0.17
LRRK2Q5S007 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14□□□□□ -0.17
LRRK2Q5S007 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14□□□□□ -0.17
LRRK2Q5S007 AL049840.4-201ENST00000602422 811 ntBASIC14□□□□□ -0.17
LRRK2Q5S007 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRK2Q5S007 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14□□□□□ -0.17
LRRK2Q5S007 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 RPSAP36-202ENST00000494591 1261 ntBASIC14□□□□□ -0.17
LRRK2Q5S007 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14□□□□□ -0.17
LRRK2Q5S007 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14□□□□□ -0.17
LRRK2Q5S007 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14□□□□□ -0.17
LRRK2Q5S007 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14□□□□□ -0.17
LRRK2Q5S007 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14□□□□□ -0.17
LRRK2Q5S007 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14□□□□□ -0.17
LRRK2Q5S007 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRK2Q5S007 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRK2Q5S007 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRRK2Q5S007 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 AC093724.1-201ENST00000448659 1027 ntBASIC13.99□□□□□ -0.17
LRRK2Q5S007 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 MIR4750-201ENST00000584564 56 ntBASIC13.99□□□□□ -0.17
LRRK2Q5S007 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 AL139011.1-202ENST00000642063 584 ntBASIC13.99□□□□□ -0.17
LRRK2Q5S007 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms