Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO4P61968 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO4P61968 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO4P61968 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO4P61968 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO4P61968 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
LMO4P61968 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.38□□□□□ -0.27
LMO4P61968 AC140912.1-201ENST00000577171 1054 ntBASIC13.38□□□□□ -0.27
LMO4P61968 AC004790.1-201ENST00000612686 536 ntBASIC13.38□□□□□ -0.27
LMO4P61968 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LMO4P61968 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO4P61968 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO4P61968 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO4P61968 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LMO4P61968 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.38□□□□□ -0.27
LMO4P61968 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.38□□□□□ -0.27
LMO4P61968 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LMO4P61968 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO4P61968 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO4P61968 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LMO4P61968 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO4P61968 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LMO4P61968 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 CYP4F24P-201ENST00000586049 1580 ntBASIC13.37□□□□□ -0.27
LMO4P61968 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 AL391825.1-201ENST00000457671 1364 ntBASIC13.37□□□□□ -0.27
LMO4P61968 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LMO4P61968 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 FO393414.2-201ENST00000405153 598 ntBASIC13.37□□□□□ -0.27
LMO4P61968 AC087499.6-201ENST00000411576 835 ntBASIC13.37□□□□□ -0.27
LMO4P61968 COX5BP8-201ENST00000416911 349 ntBASIC13.37□□□□□ -0.27
LMO4P61968 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 HIST3H2BA-201ENST00000436555 524 ntBASIC13.37□□□□□ -0.27
LMO4P61968 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO4P61968 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO4P61968 SPDYE18-201ENST00000510091 1050 ntBASIC13.37□□□□□ -0.27
LMO4P61968 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 SRD5A3P1-201ENST00000603021 949 ntBASIC13.37□□□□□ -0.27
LMO4P61968 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LMO4P61968 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.37□□□□□ -0.27
LMO4P61968 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 AC004461.2-201ENST00000629517 803 ntBASIC13.37□□□□□ -0.27
LMO4P61968 AL109936.8-201ENST00000641772 604 ntBASIC13.37□□□□□ -0.27
LMO4P61968 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
LMO4P61968 AL592424.1-201ENST00000563624 1536 ntBASIC13.37□□□□□ -0.27
LMO4P61968 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LMO4P61968 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LMO4P61968 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.37□□□□□ -0.27
LMO4P61968 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
LMO4P61968 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO4P61968 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
LMO4P61968 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LMO4P61968 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LMO4P61968 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO4P61968 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO4P61968 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.36□□□□□ -0.27
LMO4P61968 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LMO4P61968 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms