Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
WNT3P56703 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
WNT3P56703 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.53■□□□□ 0.08
WNT3P56703 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.53■□□□□ 0.08
WNT3P56703 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 VN2R19P-201ENST00000442399 1052 ntBASIC15.53■□□□□ 0.08
WNT3P56703 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 KRT18P2-201ENST00000447938 1258 ntBASIC15.53■□□□□ 0.08
WNT3P56703 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.53■□□□□ 0.08
WNT3P56703 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.53■□□□□ 0.08
WNT3P56703 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.53■□□□□ 0.08
WNT3P56703 RNA5SP416-201ENST00000516838 111 ntBASIC15.53■□□□□ 0.08
WNT3P56703 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 AC064836.3-201ENST00000607928 673 ntBASIC15.53■□□□□ 0.08
WNT3P56703 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.53■□□□□ 0.08
WNT3P56703 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 LINC00554-201ENST00000564841 3011 ntBASIC15.53■□□□□ 0.08
WNT3P56703 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
WNT3P56703 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.53■□□□□ 0.08
WNT3P56703 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
WNT3P56703 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.52■□□□□ 0.08
WNT3P56703 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.52■□□□□ 0.08
WNT3P56703 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.52■□□□□ 0.08
WNT3P56703 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
WNT3P56703 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 PMS2P4-201ENST00000412466 1052 ntBASIC15.52■□□□□ 0.08
WNT3P56703 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.52■□□□□ 0.08
WNT3P56703 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.52■□□□□ 0.08
WNT3P56703 AL591424.1-201ENST00000442569 1213 ntBASIC15.52■□□□□ 0.08
WNT3P56703 HCG4B-203ENST00000450128 991 ntBASIC15.52■□□□□ 0.08
WNT3P56703 AL513480.1-201ENST00000451731 511 ntBASIC15.52■□□□□ 0.08
WNT3P56703 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
WNT3P56703 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.52■□□□□ 0.08
WNT3P56703 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.52■□□□□ 0.08
WNT3P56703 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.52■□□□□ 0.08
WNT3P56703 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.52■□□□□ 0.08
WNT3P56703 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.52■□□□□ 0.08
WNT3P56703 AC055717.3-201ENST00000622967 595 ntBASIC15.52■□□□□ 0.08
WNT3P56703 AC092919.2-201ENST00000623631 1645 ntBASIC15.52■□□□□ 0.08
WNT3P56703 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
WNT3P56703 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.52■□□□□ 0.07
WNT3P56703 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3P56703 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms