Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA4P54764 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.77■□□□□ 0.12
EPHA4P54764 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA4P54764 MTND6P24-201ENST00000440466 518 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 COX20P2-201ENST00000452636 358 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 UGT1A2P-201ENST00000454886 866 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA4P54764 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA4P54764 BANF1P1-201ENST00000553684 263 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 RN7SL204P-201ENST00000582831 262 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.77■□□□□ 0.12
EPHA4P54764 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA4P54764 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA4P54764 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.77■□□□□ 0.11
EPHA4P54764 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA4P54764 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA4P54764 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
EPHA4P54764 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA4P54764 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA4P54764 AC005915.1-201ENST00000624912 2018 ntBASIC15.77■□□□□ 0.11
EPHA4P54764 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.77■□□□□ 0.11
EPHA4P54764 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
EPHA4P54764 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 GGT3P-204ENST00000453783 1664 ntBASIC15.76■□□□□ 0.11
EPHA4P54764 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.76■□□□□ 0.11
EPHA4P54764 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA4P54764 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
EPHA4P54764 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA4P54764 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
EPHA4P54764 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 AC022144.1-201ENST00000602255 1580 ntBASIC15.76■□□□□ 0.11
EPHA4P54764 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 AC236430.1-201ENST00000402231 743 ntBASIC15.76■□□□□ 0.11
EPHA4P54764 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.76■□□□□ 0.11
EPHA4P54764 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.76■□□□□ 0.11
EPHA4P54764 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.76■□□□□ 0.11
EPHA4P54764 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA4P54764 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.76■□□□□ 0.11
EPHA4P54764 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.76■□□□□ 0.11
EPHA4P54764 TEX28P1-201ENST00000613479 1221 ntBASIC15.76■□□□□ 0.11
EPHA4P54764 TEX28P2-201ENST00000617764 1221 ntBASIC15.76■□□□□ 0.11
EPHA4P54764 AC008761.3-201ENST00000624803 892 ntBASIC15.76■□□□□ 0.11
EPHA4P54764 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
EPHA4P54764 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
EPHA4P54764 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
EPHA4P54764 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
EPHA4P54764 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
EPHA4P54764 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA4P54764 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 AC011676.5-201ENST00000624864 2660 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 OR6D1P-203ENST00000641209 4860 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 AC087499.5-201ENST00000452760 1342 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA4P54764 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 AC190387.1-201ENST00000551683 408 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA4P54764 AL079307.3-201ENST00000556114 283 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.75■□□□□ 0.11
EPHA4P54764 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms