Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MMP13P45452 MED15P5-201ENST00000423150 992 ntBASIC17.11■□□□□ 0.33
MMP13P45452 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 AL591424.1-201ENST00000442569 1213 ntBASIC17.11■□□□□ 0.33
MMP13P45452 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP13P45452 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MMP13P45452 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 CYP2A7P1-201ENST00000595391 815 ntBASIC17.11■□□□□ 0.33
MMP13P45452 AC140113.2-201ENST00000604370 208 ntBASIC17.11■□□□□ 0.33
MMP13P45452 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 AC012569.1-201ENST00000591191 1524 ntBASIC17.11■□□□□ 0.33
MMP13P45452 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MMP13P45452 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 AC010491.1-201ENST00000563101 2797 ntBASIC17.1■□□□□ 0.33
MMP13P45452 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MMP13P45452 RHOQP3-201ENST00000437982 621 ntBASIC17.1■□□□□ 0.33
MMP13P45452 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP13P45452 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP13P45452 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 AC018845.2-201ENST00000568326 409 ntBASIC17.1■□□□□ 0.33
MMP13P45452 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 MIR4515-201ENST00000584082 81 ntBASIC17.1■□□□□ 0.33
MMP13P45452 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
MMP13P45452 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MMP13P45452 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP13P45452 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP13P45452 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MMP13P45452 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP13P45452 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP13P45452 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP13P45452 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MMP13P45452 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MMP13P45452 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP13P45452 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 AL136379.1-201ENST00000623471 2642 ntBASIC17.09■□□□□ 0.33
MMP13P45452 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MMP13P45452 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.09■□□□□ 0.33
MMP13P45452 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MMP13P45452 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.09■□□□□ 0.33
MMP13P45452 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MMP13P45452 KRT18P2-201ENST00000447938 1258 ntBASIC17.09■□□□□ 0.33
MMP13P45452 KRT18P3-201ENST00000451602 1288 ntBASIC17.09■□□□□ 0.33
MMP13P45452 RNA5SP416-201ENST00000516838 111 ntBASIC17.09■□□□□ 0.33
MMP13P45452 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP13P45452 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MMP13P45452 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP13P45452 FAM197Y3-203ENST00000618346 717 ntBASIC17.09■□□□□ 0.33
MMP13P45452 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MMP13P45452 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MMP13P45452 AC099063.4-201ENST00000641099 1602 ntBASIC17.09■□□□□ 0.33
MMP13P45452 AC022532.1-201ENST00000624563 1728 ntBASIC17.09■□□□□ 0.33
MMP13P45452 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP13P45452 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms