Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HOXC8P31273 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC8P31273 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC8P31273 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC8P31273 AC008735.3-201ENST00000596646 500 ntBASIC17.67■□□□□ 0.42
HOXC8P31273 AL512343.1-201ENST00000605837 169 ntBASIC17.67■□□□□ 0.42
HOXC8P31273 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXC8P31273 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXC8P31273 AL033527.5-201ENST00000641382 801 ntBASIC17.67■□□□□ 0.42
HOXC8P31273 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC8P31273 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC8P31273 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC8P31273 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC8P31273 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC8P31273 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC8P31273 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC8P31273 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC8P31273 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXC8P31273 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
HOXC8P31273 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
HOXC8P31273 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC8P31273 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC8P31273 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC8P31273 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXC8P31273 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC8P31273 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXC8P31273 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HOXC8P31273 CLK3P2-201ENST00000427566 1453 ntBASIC17.66■□□□□ 0.42
HOXC8P31273 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC8P31273 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC8P31273 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC8P31273 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HOXC8P31273 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HOXC8P31273 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC8P31273 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
HOXC8P31273 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 TOMM22P5-201ENST00000416399 439 ntBASIC17.65■□□□□ 0.42
HOXC8P31273 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 AL442647.2-201ENST00000429864 857 ntBASIC17.65■□□□□ 0.42
HOXC8P31273 RPS2P32-201ENST00000439199 892 ntBASIC17.65■□□□□ 0.42
HOXC8P31273 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXC8P31273 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
HOXC8P31273 AC015936.2-201ENST00000593177 259 ntBASIC17.65■□□□□ 0.42
HOXC8P31273 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HOXC8P31273 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC8P31273 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC8P31273 REXO1L8P-201ENST00000604378 1897 ntBASIC17.65■□□□□ 0.42
HOXC8P31273 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC8P31273 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HOXC8P31273 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HOXC8P31273 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC8P31273 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms