Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ATP2B1P20020 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2B1P20020 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 PCGF3-213ENST00000620529 1899 ntBASIC18.97■□□□□ 0.63
ATP2B1P20020 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP2B1P20020 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2B1P20020 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
ATP2B1P20020 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP2B1P20020 POLD2P1-201ENST00000511220 997 ntBASIC18.97■□□□□ 0.63
ATP2B1P20020 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
ATP2B1P20020 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.97■□□□□ 0.63
ATP2B1P20020 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2B1P20020 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP2B1P20020 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP2B1P20020 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP2B1P20020 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
ATP2B1P20020 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2B1P20020 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2B1P20020 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ATP2B1P20020 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2B1P20020 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.96■□□□□ 0.63
ATP2B1P20020 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2B1P20020 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2B1P20020 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2B1P20020 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2B1P20020 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
ATP2B1P20020 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP2B1P20020 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATP2B1P20020 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP2B1P20020 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP2B1P20020 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2B1P20020 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP2B1P20020 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2B1P20020 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.95■□□□□ 0.62
ATP2B1P20020 KRT18P58-201ENST00000527480 1120 ntBASIC18.95■□□□□ 0.62
ATP2B1P20020 AL671883.3-201ENST00000603274 991 ntBASIC18.95■□□□□ 0.62
ATP2B1P20020 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP2B1P20020 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2B1P20020 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP2B1P20020 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms