Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
PDGFRAP16234 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFRAP16234 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFRAP16234 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.24■□□□□ 0.35
PDGFRAP16234 AC099522.2-201ENST00000607001 744 ntBASIC17.24■□□□□ 0.35
PDGFRAP16234 AC092902.6-201ENST00000641783 218 ntBASIC17.24■□□□□ 0.35
PDGFRAP16234 AC006449.6-201ENST00000612330 2296 ntBASIC17.24■□□□□ 0.35
PDGFRAP16234 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PDGFRAP16234 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDGFRAP16234 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFRAP16234 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFRAP16234 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 AC018695.7-201ENST00000624587 2492 ntBASIC17.23■□□□□ 0.35
PDGFRAP16234 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFRAP16234 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDGFRAP16234 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFRAP16234 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFRAP16234 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFRAP16234 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDGFRAP16234 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDGFRAP16234 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFRAP16234 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFRAP16234 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 AL596087.1-201ENST00000400979 1969 ntBASIC17.22■□□□□ 0.35
PDGFRAP16234 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFRAP16234 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFRAP16234 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFRAP16234 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.22■□□□□ 0.35
PDGFRAP16234 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PDGFRAP16234 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFRAP16234 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.22■□□□□ 0.35
PDGFRAP16234 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFRAP16234 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFRAP16234 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDGFRAP16234 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFRAP16234 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFRAP16234 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PDGFRAP16234 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 AL391005.1-201ENST00000623953 2435 ntBASIC17.21■□□□□ 0.35
PDGFRAP16234 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFRAP16234 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFRAP16234 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFRAP16234 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFRAP16234 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms