Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT3P12035 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT3P12035 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT3P12035 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT3P12035 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT3P12035 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT3P12035 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 AL022342.1-201ENST00000400363 863 ntBASIC17.32■□□□□ 0.36
KRT3P12035 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT3P12035 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT3P12035 KRT18P34-201ENST00000488218 1270 ntBASIC17.32■□□□□ 0.36
KRT3P12035 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 AP002472.1-201ENST00000577490 586 ntBASIC17.32■□□□□ 0.36
KRT3P12035 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT3P12035 AL078644.1-201ENST00000609881 752 ntBASIC17.32■□□□□ 0.36
KRT3P12035 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
KRT3P12035 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT3P12035 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.32■□□□□ 0.36
KRT3P12035 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KRT3P12035 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT3P12035 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 AL161645.1-201ENST00000622716 1255 ntBASIC17.31■□□□□ 0.36
KRT3P12035 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 AC016027.1-202ENST00000607927 1699 ntBASIC17.31■□□□□ 0.36
KRT3P12035 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.31■□□□□ 0.36
KRT3P12035 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT3P12035 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT3P12035 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT3P12035 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT3P12035 PCDHA1-201ENST00000378133 2726 ntBASIC17.3■□□□□ 0.36
KRT3P12035 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 MIR574-201ENST00000385209 96 ntBASIC17.3■□□□□ 0.36
KRT3P12035 AC002056.1-201ENST00000395613 760 ntBASIC17.3■□□□□ 0.36
KRT3P12035 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT3P12035 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT3P12035 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT3P12035 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT3P12035 AC112191.1-201ENST00000523689 701 ntBASIC17.3■□□□□ 0.36
KRT3P12035 KRT18P58-201ENST00000527480 1120 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms