Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.48■□□□□ 0.55
TPM3P06753 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.48■□□□□ 0.55
TPM3P06753 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TPM3P06753 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.48■□□□□ 0.55
TPM3P06753 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.48■□□□□ 0.55
TPM3P06753 AP005901.3-202ENST00000581653 237 ntBASIC18.48■□□□□ 0.55
TPM3P06753 TERC-201ENST00000602385 541 ntBASIC18.48■□□□□ 0.55
TPM3P06753 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TPM3P06753 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.48■□□□□ 0.55
TPM3P06753 AP000867.4-201ENST00000641616 219 ntBASIC18.48■□□□□ 0.55
TPM3P06753 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.48■□□□□ 0.55
TPM3P06753 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
TPM3P06753 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM3P06753 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM3P06753 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.47■□□□□ 0.55
TPM3P06753 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 AC006486.2-201ENST00000624246 2199 ntBASIC18.47■□□□□ 0.55
TPM3P06753 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.47■□□□□ 0.55
TPM3P06753 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM3P06753 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM3P06753 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TPM3P06753 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM3P06753 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 AC004817.3-201ENST00000602957 2129 ntBASIC18.47■□□□□ 0.55
TPM3P06753 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TPM3P06753 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TPM3P06753 AC016027.1-202ENST00000607927 1699 ntBASIC18.47■□□□□ 0.55
TPM3P06753 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM3P06753 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM3P06753 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM3P06753 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.46■□□□□ 0.55
TPM3P06753 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.46■□□□□ 0.55
TPM3P06753 AC233702.3-201ENST00000578656 1387 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms