Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.42■□□□□ 0.06
PDGFAP04085 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFAP04085 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFAP04085 AL138918.1-201ENST00000568306 659 ntBASIC15.42■□□□□ 0.06
PDGFAP04085 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDGFAP04085 AL031055.1-201ENST00000606362 631 ntBASIC15.42■□□□□ 0.06
PDGFAP04085 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFAP04085 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PDGFAP04085 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDGFAP04085 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFAP04085 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 AC016027.1-202ENST00000607927 1699 ntBASIC15.41■□□□□ 0.06
PDGFAP04085 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDGFAP04085 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFAP04085 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PDGFAP04085 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFAP04085 AC241585.1-201ENST00000433527 519 ntBASIC15.41■□□□□ 0.06
PDGFAP04085 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDGFAP04085 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.41■□□□□ 0.06
PDGFAP04085 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.41■□□□□ 0.06
PDGFAP04085 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PDGFAP04085 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PDGFAP04085 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFAP04085 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDGFAP04085 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDGFAP04085 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFAP04085 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PDGFAP04085 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.4■□□□□ 0.06
PDGFAP04085 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 AC105020.1-201ENST00000435356 2205 ntBASIC15.4■□□□□ 0.06
PDGFAP04085 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PDGFAP04085 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.4■□□□□ 0.06
PDGFAP04085 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 TSSK5P-201ENST00000423978 907 ntBASIC15.4■□□□□ 0.06
PDGFAP04085 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.4■□□□□ 0.06
PDGFAP04085 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.4■□□□□ 0.06
PDGFAP04085 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.4■□□□□ 0.06
PDGFAP04085 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.4■□□□□ 0.06
PDGFAP04085 SPDYE22P-201ENST00000582158 798 ntBASIC15.4■□□□□ 0.06
PDGFAP04085 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.4■□□□□ 0.06
PDGFAP04085 AL662799.1-202ENST00000614205 422 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms