Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 MIR326-201ENST00000362220 95 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 C2orf27AP3-201ENST00000434123 579 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 AC079328.1-201ENST00000560358 952 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 AL021578.1-201ENST00000613646 709 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 AL354718.3-201ENST00000616414 581 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 CR382287.1-201ENST00000623954 586 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 AC009113.1-201ENST00000570267 2443 ntBASIC18.48■□□□□ 0.55
ALDH1A1P00352 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALDH1A1P00352 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ALDH1A1P00352 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 TNXA-203ENST00000507684 2038 ntBASIC18.47■□□□□ 0.55
ALDH1A1P00352 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AC120045.2-201ENST00000567334 178 ntBASIC18.47■□□□□ 0.55
ALDH1A1P00352 CLUHP6-201ENST00000580789 941 ntBASIC18.47■□□□□ 0.55
ALDH1A1P00352 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALDH1A1P00352 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.47■□□□□ 0.55
ALDH1A1P00352 AL607033.1-201ENST00000623900 1599 ntBASIC18.47■□□□□ 0.55
ALDH1A1P00352 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 AC104306.2-201ENST00000451877 341 ntBASIC18.46■□□□□ 0.55
ALDH1A1P00352 AKR7A2P1-201ENST00000460134 915 ntBASIC18.46■□□□□ 0.55
ALDH1A1P00352 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 AC244669.2-201ENST00000612320 853 ntBASIC18.46■□□□□ 0.55
ALDH1A1P00352 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.46■□□□□ 0.55
ALDH1A1P00352 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ALDH1A1P00352 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms