Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.17■□□□□ 0.34
BEST1O76090 AC007967.4-201ENST00000614700 386 ntBASIC17.17■□□□□ 0.34
BEST1O76090 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.17■□□□□ 0.34
BEST1O76090 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST1O76090 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST1O76090 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 FO538757.1-201ENST00000623083 1397 ntBASIC17.16■□□□□ 0.34
BEST1O76090 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST1O76090 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BEST1O76090 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BEST1O76090 MIR943-201ENST00000401286 94 ntBASIC17.16■□□□□ 0.34
BEST1O76090 TREML5P-201ENST00000421694 576 ntBASIC17.16■□□□□ 0.34
BEST1O76090 AC107890.1-201ENST00000422478 521 ntBASIC17.16■□□□□ 0.34
BEST1O76090 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.16■□□□□ 0.34
BEST1O76090 AC140878.1-201ENST00000565277 250 ntBASIC17.16■□□□□ 0.34
BEST1O76090 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.16■□□□□ 0.34
BEST1O76090 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.16■□□□□ 0.34
BEST1O76090 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST1O76090 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
BEST1O76090 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BEST1O76090 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST1O76090 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.15■□□□□ 0.34
BEST1O76090 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BEST1O76090 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BEST1O76090 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.15■□□□□ 0.34
BEST1O76090 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.15■□□□□ 0.34
BEST1O76090 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST1O76090 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BEST1O76090 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.15■□□□□ 0.34
BEST1O76090 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST1O76090 AC105021.1-202ENST00000570572 669 ntBASIC17.15■□□□□ 0.34
BEST1O76090 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BEST1O76090 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.15■□□□□ 0.34
BEST1O76090 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BEST1O76090 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST1O76090 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST1O76090 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.14■□□□□ 0.34
BEST1O76090 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BEST1O76090 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST1O76090 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.14■□□□□ 0.33
BEST1O76090 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 AC092580.3-201ENST00000430932 139 ntBASIC17.14■□□□□ 0.33
BEST1O76090 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.14■□□□□ 0.33
BEST1O76090 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST1O76090 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.14■□□□□ 0.33
BEST1O76090 AC097493.3-201ENST00000509725 367 ntBASIC17.14■□□□□ 0.33
BEST1O76090 AC024267.1-201ENST00000582320 895 ntBASIC17.14■□□□□ 0.33
BEST1O76090 AL133215.2-201ENST00000609242 977 ntBASIC17.14■□□□□ 0.33
BEST1O76090 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
BEST1O76090 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST1O76090 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms