Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF253O75346 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ZNF253O75346 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ZNF253O75346 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF253O75346 KRT18P1-202ENST00000452408 1331 ntBASIC12.87□□□□□ -0.35
ZNF253O75346 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZNF253O75346 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF253O75346 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF253O75346 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.86□□□□□ -0.35
ZNF253O75346 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.86□□□□□ -0.35
ZNF253O75346 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 TSSC2-201ENST00000450217 709 ntBASIC12.86□□□□□ -0.35
ZNF253O75346 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.86□□□□□ -0.35
ZNF253O75346 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 AC010331.1-201ENST00000611423 582 ntBASIC12.86□□□□□ -0.35
ZNF253O75346 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 AC148477.5-201ENST00000625164 1645 ntBASIC12.86□□□□□ -0.35
ZNF253O75346 AC097637.2-201ENST00000624096 1997 ntBASIC12.86□□□□□ -0.35
ZNF253O75346 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
ZNF253O75346 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZNF253O75346 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.86□□□□□ -0.35
ZNF253O75346 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF253O75346 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF253O75346 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF253O75346 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms