Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC006158.1-201ENST00000610661 249 ntBASIC17.37■□□□□ 0.37
TNRC18O15417 AC006453.1-201ENST00000636037 1257 ntBASIC17.37■□□□□ 0.37
TNRC18O15417 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNRC18O15417 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TNRC18O15417 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.36■□□□□ 0.37
TNRC18O15417 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TNRC18O15417 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.36■□□□□ 0.37
TNRC18O15417 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.36■□□□□ 0.37
TNRC18O15417 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TNRC18O15417 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 AC079112.1-201ENST00000454972 939 ntBASIC17.36■□□□□ 0.37
TNRC18O15417 AC084262.1-201ENST00000567818 751 ntBASIC17.36■□□□□ 0.37
TNRC18O15417 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNRC18O15417 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.36■□□□□ 0.37
TNRC18O15417 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.36■□□□□ 0.37
TNRC18O15417 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.35■□□□□ 0.37
TNRC18O15417 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.35■□□□□ 0.37
TNRC18O15417 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.35■□□□□ 0.37
TNRC18O15417 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.35■□□□□ 0.37
TNRC18O15417 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 MIR6858-201ENST00000620733 67 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 AC135050.7-201ENST00000624508 2218 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.35■□□□□ 0.37
TNRC18O15417 AL354989.2-201ENST00000435838 1540 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.35■□□□□ 0.37
TNRC18O15417 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TNRC18O15417 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 AC079178.1-201ENST00000420915 656 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.35■□□□□ 0.37
TNRC18O15417 AC006335.1-201ENST00000445200 547 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 RTN3P1-201ENST00000536295 711 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.35■□□□□ 0.37
TNRC18O15417 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.35■□□□□ 0.37
TNRC18O15417 AL805961.1-203ENST00000641078 1258 ntBASIC17.35■□□□□ 0.37
TNRC18O15417 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.35■□□□□ 0.37
TNRC18O15417 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.35■□□□□ 0.37
TNRC18O15417 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNRC18O15417 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.34■□□□□ 0.37
TNRC18O15417 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.34■□□□□ 0.37
TNRC18O15417 AC105137.3-201ENST00000617588 984 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 AC004899.1-201ENST00000424687 1714 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TNRC18O15417 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 TPM3P8-201ENST00000330554 643 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 AC026410.3-201ENST00000514280 936 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TNRC18O15417 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.34■□□□□ 0.37
TNRC18O15417 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNRC18O15417 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.34■□□□□ 0.37
TNRC18O15417 RPL7P35-201ENST00000446943 740 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.34■□□□□ 0.37
TNRC18O15417 AL132780.4-201ENST00000624870 1135 ntBASIC17.34■□□□□ 0.37
TNRC18O15417 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.33■□□□□ 0.37
TNRC18O15417 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms