Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
APAF1O14727 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
APAF1O14727 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
APAF1O14727 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.58■■□□□ 1.04
APAF1O14727 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
APAF1O14727 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.58■■□□□ 1.04
APAF1O14727 AC026691.1-201ENST00000602502 2017 ntBASIC21.58■■□□□ 1.04
APAF1O14727 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.58■■□□□ 1.04
APAF1O14727 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
APAF1O14727 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
APAF1O14727 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 RPS8P6-201ENST00000426177 609 ntBASIC21.57■■□□□ 1.04
APAF1O14727 AC005237.2-201ENST00000434368 219 ntBASIC21.57■■□□□ 1.04
APAF1O14727 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.57■■□□□ 1.04
APAF1O14727 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 PCDHA1-201ENST00000378133 2726 ntBASIC21.57■■□□□ 1.04
APAF1O14727 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
APAF1O14727 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.57■■□□□ 1.04
APAF1O14727 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
APAF1O14727 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
APAF1O14727 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
APAF1O14727 AC254562.1-201ENST00000417586 456 ntBASIC21.56■■□□□ 1.04
APAF1O14727 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 AC098859.1-201ENST00000502915 1238 ntBASIC21.56■■□□□ 1.04
APAF1O14727 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.56■■□□□ 1.04
APAF1O14727 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.56■■□□□ 1.04
APAF1O14727 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.56■■□□□ 1.04
APAF1O14727 AC027612.4-201ENST00000605371 583 ntBASIC21.56■■□□□ 1.04
APAF1O14727 AL691403.2-201ENST00000618460 490 ntBASIC21.56■■□□□ 1.04
APAF1O14727 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.56■■□□□ 1.04
APAF1O14727 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
APAF1O14727 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
APAF1O14727 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.55■■□□□ 1.04
APAF1O14727 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.55■■□□□ 1.04
APAF1O14727 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.55■■□□□ 1.04
APAF1O14727 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.55■■□□□ 1.04
APAF1O14727 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.55■■□□□ 1.04
APAF1O14727 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
APAF1O14727 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.55■■□□□ 1.04
APAF1O14727 CNN2P11-201ENST00000429351 262 ntBASIC21.55■■□□□ 1.04
APAF1O14727 GPS2P2-201ENST00000430745 888 ntBASIC21.55■■□□□ 1.04
APAF1O14727 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.55■■□□□ 1.04
APAF1O14727 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.55■■□□□ 1.04
APAF1O14727 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.55■■□□□ 1.04
APAF1O14727 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.55■■□□□ 1.04
APAF1O14727 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.55■■□□□ 1.04
APAF1O14727 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
APAF1O14727 AC004835.2-201ENST00000603762 682 ntBASIC21.55■■□□□ 1.04
APAF1O14727 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms