Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHD2O14647 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHD2O14647 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CHD2O14647 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CHD2O14647 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC22.33■■□□□ 1.17
CHD2O14647 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHD2O14647 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHD2O14647 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC22.33■■□□□ 1.17
CHD2O14647 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC22.33■■□□□ 1.16
CHD2O14647 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC22.33■■□□□ 1.16
CHD2O14647 EIF4HP1-201ENST00000453115 687 ntBASIC22.33■■□□□ 1.16
CHD2O14647 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC22.33■■□□□ 1.16
CHD2O14647 AC078819.1-201ENST00000547454 765 ntBASIC22.33■■□□□ 1.16
CHD2O14647 AC012085.1-201ENST00000548270 765 ntBASIC22.33■■□□□ 1.16
CHD2O14647 AC079328.1-201ENST00000560358 952 ntBASIC22.33■■□□□ 1.16
CHD2O14647 AC243562.2-201ENST00000561247 970 ntBASIC22.33■■□□□ 1.16
CHD2O14647 AP006547.1-201ENST00000563435 692 ntBASIC22.33■■□□□ 1.16
CHD2O14647 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC22.33■■□□□ 1.16
CHD2O14647 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
CHD2O14647 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 KRT8P19-201ENST00000551916 1455 ntBASIC22.33■■□□□ 1.16
CHD2O14647 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.33■■□□□ 1.16
CHD2O14647 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHD2O14647 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC22.32■■□□□ 1.16
CHD2O14647 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC22.32■■□□□ 1.16
CHD2O14647 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.32■■□□□ 1.16
CHD2O14647 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 HINT2P1-201ENST00000419438 481 ntBASIC22.32■■□□□ 1.16
CHD2O14647 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
CHD2O14647 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC22.32■■□□□ 1.16
CHD2O14647 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 AP001258.2-201ENST00000529891 490 ntBASIC22.32■■□□□ 1.16
CHD2O14647 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.32■■□□□ 1.16
CHD2O14647 LETM1P2-201ENST00000597330 2178 ntBASIC22.32■■□□□ 1.16
CHD2O14647 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.32■■□□□ 1.16
CHD2O14647 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC22.32■■□□□ 1.16
CHD2O14647 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CHD2O14647 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD2O14647 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD2O14647 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CHD2O14647 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC22.31■■□□□ 1.16
CHD2O14647 AC004898.1-201ENST00000451057 766 ntBASIC22.31■■□□□ 1.16
CHD2O14647 HIST2H2BC-201ENST00000498492 580 ntBASIC22.31■■□□□ 1.16
CHD2O14647 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC22.31■■□□□ 1.16
CHD2O14647 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 NAT9-224ENST00000583757 583 ntTSL 3 BASIC22.31■■□□□ 1.16
CHD2O14647 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CHD2O14647 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC22.31■■□□□ 1.16
CHD2O14647 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC22.31■■□□□ 1.16
CHD2O14647 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC22.31■■□□□ 1.16
CHD2O14647 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CHD2O14647 AC136604.1-201ENST00000418535 575 ntBASIC22.31■■□□□ 1.16
CHD2O14647 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD2O14647 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHD2O14647 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CHD2O14647 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHD2O14647 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHD2O14647 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHD2O14647 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CHD2O14647 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms