Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GOLGA6L4A6NEF3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 GPAA1P2-202ENST00000606848 1787 ntBASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 RBM17P3-201ENST00000417687 1192 ntBASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 AC087163.2-201ENST00000457299 853 ntBASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 REXO1L8P-201ENST00000604378 1897 ntBASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 AF228730.7-201ENST00000641842 219 ntBASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GOLGA6L4A6NEF3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 MTDHP3-201ENST00000594186 672 ntBASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 PRAL-201ENST00000624952 3286 ntBASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GOLGA6L4A6NEF3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 ATP5G2P1-201ENST00000433580 426 ntBASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.02■□□□□ 0.64
GOLGA6L4A6NEF3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms