Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AC027369.6-201ENST00000525520 931 ntBASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 MPDU1-223ENST00000582151 728 ntBASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 LINC00554-201ENST00000564841 3011 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AC142381.1-201ENST00000426099 345 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 SERBP1P5-201ENST00000510079 1181 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AP005018.1-201ENST00000525475 301 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 RARRES2P9-201ENST00000565168 469 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 SPDYE22P-201ENST00000582158 798 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AC073389.1-201ENST00000595595 795 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AC007967.4-201ENST00000614700 386 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AL590560.3-201ENST00000623350 461 ntBASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA9Q9Y5G4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 AC016396.2-201ENST00000562575 1417 ntBASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 AC025048.6-201ENST00000634326 1161 ntBASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA9Q9Y5G4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms