Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 U91328.1-201ENST00000437528 223 ntBASIC22.27■■□□□ 1.16
NINLQ9Y2I6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.27■■□□□ 1.16
NINLQ9Y2I6 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.27■■□□□ 1.16
NINLQ9Y2I6 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.27■■□□□ 1.16
NINLQ9Y2I6 5S_rRNA.22-201ENST00000614916 106 ntBASIC22.27■■□□□ 1.16
NINLQ9Y2I6 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.27■■□□□ 1.16
NINLQ9Y2I6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
NINLQ9Y2I6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 ME2P1-201ENST00000426028 1970 ntBASIC22.26■■□□□ 1.15
NINLQ9Y2I6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NINLQ9Y2I6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AC004790.1-201ENST00000612686 536 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AL662799.1-202ENST00000614205 422 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AL136982.4-201ENST00000437689 1740 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 HIST3H2BA-201ENST00000436555 524 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 KRT17P7-201ENST00000451704 1104 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC22.25■■□□□ 1.15
NINLQ9Y2I6 AC104794.3-201ENST00000566840 1248 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 NKILA-202ENST00000614771 2598 ntBASIC22.25■■□□□ 1.15
NINLQ9Y2I6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms