Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 AL391005.1-201ENST00000623953 2435 ntBASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 AC012569.1-201ENST00000591191 1524 ntBASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDZRN3Q9UPQ7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 WASH6P-202ENST00000359512 1437 ntBASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 AC008267.7-201ENST00000624570 1194 ntBASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 AC008741.2-201ENST00000612792 3115 ntBASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.15■□□□□ 0.98
PDZRN3Q9UPQ7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDZRN3Q9UPQ7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 AP002490.2-201ENST00000524791 560 ntBASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 AP005018.1-201ENST00000525475 301 ntBASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 ALG1L8P-201ENST00000533887 760 ntBASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 AC009118.2-201ENST00000613275 655 ntBASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 MIR6080-201ENST00000617359 66 ntBASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDZRN3Q9UPQ7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms