Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 AL391256.1-201ENST00000443260 1855 ntBASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 PCDHA12-202ENST00000613593 2588 ntBASIC18.81■□□□□ 0.6
PNMA3Q9UL41 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 ELK1P1-201ENST00000485699 580 ntBASIC18.81■□□□□ 0.6
PNMA3Q9UL41 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 RRP7BP-205ENST00000566851 833 ntBASIC18.81■□□□□ 0.6
PNMA3Q9UL41 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 PCDHB17P-201ENST00000539533 2393 ntBASIC18.81■□□□□ 0.6
PNMA3Q9UL41 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNMA3Q9UL41 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 AC092068.3-201ENST00000587894 2016 ntBASIC18.8■□□□□ 0.6
PNMA3Q9UL41 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 AC022210.1-201ENST00000449856 793 ntBASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.8■□□□□ 0.6
PNMA3Q9UL41 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 GPAA1P2-202ENST00000606848 1787 ntBASIC18.79■□□□□ 0.6
PNMA3Q9UL41 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PNMA3Q9UL41 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms