Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 ELL2P1-201ENST00000413990 1906 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 HMGA1P7-201ENST00000406908 502 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 AC211486.1-202ENST00000416371 468 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 AC211476.1-201ENST00000503899 468 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 AL078644.1-201ENST00000609881 752 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 AC091812.2-201ENST00000619081 385 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNIH4Q9P003 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.41■□□□□ 0.06
CNIH4Q9P003 AC006538.1-201ENST00000567905 1585 ntBASIC15.41■□□□□ 0.06
CNIH4Q9P003 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 AC004967.1-201ENST00000453589 447 ntBASIC15.4■□□□□ 0.06
CNIH4Q9P003 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 ALG1L5P-201ENST00000482043 771 ntBASIC15.4■□□□□ 0.06
CNIH4Q9P003 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 AL691403.2-201ENST00000618460 490 ntBASIC15.4■□□□□ 0.06
CNIH4Q9P003 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 SLC22A20-204ENST00000530038 1673 ntBASIC15.4■□□□□ 0.06
CNIH4Q9P003 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 PAUPAR-201ENST00000630360 2965 ntBASIC15.4■□□□□ 0.06
CNIH4Q9P003 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH4Q9P003 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CNIH4Q9P003 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms