Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AL671710.1-201ENST00000610245 2349 ntBASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 AC103702.1-201ENST00000548801 2630 ntBASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PARPBPQ9NWS1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 WASH6P-202ENST00000359512 1437 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 AKAP8P1-201ENST00000434743 1349 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 AC092919.2-201ENST00000623631 1645 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 GPX1P2-201ENST00000429271 606 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 AL671277.1-201ENST00000429656 993 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 KRT18P34-201ENST00000488218 1270 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SNX33P1-201ENST00000592116 1762 ntBASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PARPBPQ9NWS1 AC078925.2-201ENST00000624013 1973 ntBASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PARPBPQ9NWS1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms