Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 FAM220CP-201ENST00000395253 831 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC092474.1-201ENST00000416158 1167 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 UBE2V1P6-201ENST00000430840 422 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 ATP5G1P3-201ENST00000463301 410 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 RPL13AP23-201ENST00000480739 586 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC005498.2-205ENST00000593218 784 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC010680.5-201ENST00000605021 463 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC078883.4-201ENST00000623218 367 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC148477.8-201ENST00000624298 468 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AC139713.2-210ENST00000641741 992 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 AL596257.1-201ENST00000641463 2694 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 PMS2P7-201ENST00000506558 1336 ntBASIC19.49■□□□□ 0.71
RNF216Q9NWF9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF216Q9NWF9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AL139094.1-201ENST00000405549 1188 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 PACRG-AS3-201ENST00000419182 1131 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AL671883.3-201ENST00000603274 991 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AL031775.1-201ENST00000607014 887 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AC245100.7-201ENST00000609678 442 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AC022400.7-201ENST00000625041 1236 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 AC141586.5-201ENST00000624546 2050 ntBASIC19.48■□□□□ 0.71
RNF216Q9NWF9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF216Q9NWF9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.47■□□□□ 0.71
RNF216Q9NWF9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF216Q9NWF9 AC002127.1-201ENST00000421305 225 ntBASIC19.47■□□□□ 0.71
RNF216Q9NWF9 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms