Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 REXO1L8P-201ENST00000604378 1897 ntBASIC19.33■□□□□ 0.69
RNF41Q9H4P4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF41Q9H4P4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 AL139400.1-201ENST00000366220 510 ntBASIC19.33■□□□□ 0.68
RNF41Q9H4P4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 SPDYE14P-201ENST00000442619 822 ntBASIC19.33■□□□□ 0.68
RNF41Q9H4P4 AC026150.2-201ENST00000564693 1156 ntBASIC19.33■□□□□ 0.68
RNF41Q9H4P4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF41Q9H4P4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 METTL21AP1-201ENST00000438852 635 ntBASIC19.32■□□□□ 0.68
RNF41Q9H4P4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 RNA5SP410-201ENST00000516285 106 ntBASIC19.32■□□□□ 0.68
RNF41Q9H4P4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 AC025678.2-201ENST00000562061 970 ntBASIC19.32■□□□□ 0.68
RNF41Q9H4P4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
RNF41Q9H4P4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 SPDYE7P-202ENST00000420373 878 ntBASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AC004449.1-201ENST00000564240 433 ntBASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms