Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 RPL13P2-201ENST00000440687 659 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC018665.1-201ENST00000622927 1362 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC139713.2-201ENST00000641328 2723 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 REXO1L6P-201ENST00000603433 1515 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC004987.2-201ENST00000395959 1148 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AZGP1P1-201ENST00000411909 902 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AL162726.2-201ENST00000438986 1017 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC245100.5-201ENST00000452108 331 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 BNIP3P42-201ENST00000454982 569 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 BNIP3P29-201ENST00000598302 571 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AC011447.5-201ENST00000616168 564 ntBASIC21.04■□□□□ 0.96
PCDH11YQ9BZA8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 AL133373.2-201ENST00000623187 2828 ntBASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 MIR5189-201ENST00000577370 114 ntBASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH11YQ9BZA8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH11YQ9BZA8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 MIR4525-201ENST00000580000 75 ntBASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
PCDH11YQ9BZA8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms