Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 AP006288.1-201ENST00000446065 395 ntBASIC19.83■□□□□ 0.77
SALL3Q9BXA9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.83■□□□□ 0.77
SALL3Q9BXA9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL3Q9BXA9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL3Q9BXA9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 AC134407.2-201ENST00000625089 1978 ntBASIC19.82■□□□□ 0.76
SALL3Q9BXA9 HLA-H-201ENST00000383620 1096 ntBASIC19.82■□□□□ 0.76
SALL3Q9BXA9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 AL136982.4-201ENST00000437689 1740 ntBASIC19.82■□□□□ 0.76
SALL3Q9BXA9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL3Q9BXA9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 RARRES2P9-201ENST00000565168 469 ntBASIC19.81■□□□□ 0.76
SALL3Q9BXA9 AC027612.4-201ENST00000605371 583 ntBASIC19.81■□□□□ 0.76
SALL3Q9BXA9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 AC009093.7-201ENST00000623853 1223 ntBASIC19.81■□□□□ 0.76
SALL3Q9BXA9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 AC011477.6-201ENST00000604980 1927 ntBASIC19.81■□□□□ 0.76
SALL3Q9BXA9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SALL3Q9BXA9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 AP001282.1-201ENST00000531301 1499 ntBASIC19.8■□□□□ 0.76
SALL3Q9BXA9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 SPDYE14P-201ENST00000442619 822 ntBASIC19.8■□□□□ 0.76
SALL3Q9BXA9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 EEF1DP4-201ENST00000446006 880 ntBASIC19.8■□□□□ 0.76
SALL3Q9BXA9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL3Q9BXA9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms