Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ACTG1P4-201ENST00000425123 1122 ntBASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ALG1L5P-201ENST00000482043 771 ntBASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 YBX1P5-201ENST00000509441 847 ntBASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 AL513190.1-201ENST00000621254 727 ntBASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF4Q9BUZ4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AC096734.2-201ENST00000562054 433 ntBASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 C20orf181-201ENST00000623918 480 ntBASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AC010507.1-201ENST00000633895 436 ntBASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AL009178.2-201ENST00000597278 2719 ntBASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAF4Q9BUZ4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAF4Q9BUZ4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms