Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.39■■□□□ 1.01
ABCA3Q99758 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.39■■□□□ 1.01
ABCA3Q99758 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC21.39■■□□□ 1.01
ABCA3Q99758 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC21.39■■□□□ 1.01
ABCA3Q99758 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.39■■□□□ 1.01
ABCA3Q99758 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
ABCA3Q99758 AP006547.1-201ENST00000563435 692 ntBASIC21.39■■□□□ 1.01
ABCA3Q99758 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.39■■□□□ 1.01
ABCA3Q99758 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.39■■□□□ 1.01
ABCA3Q99758 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.39■■□□□ 1.01
ABCA3Q99758 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.39■■□□□ 1.01
ABCA3Q99758 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ABCA3Q99758 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
ABCA3Q99758 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ABCA3Q99758 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.38■■□□□ 1.01
ABCA3Q99758 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.38■■□□□ 1.01
ABCA3Q99758 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.38■■□□□ 1.01
ABCA3Q99758 AC078819.1-201ENST00000547454 765 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 AC012085.1-201ENST00000548270 765 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.38■■□□□ 1.01
ABCA3Q99758 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 AL121723.1-201ENST00000445194 1519 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ABCA3Q99758 AL691432.1-201ENST00000596308 1422 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ABCA3Q99758 LETM1P2-201ENST00000597330 2178 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
ABCA3Q99758 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ABCA3Q99758 CNN2P10-201ENST00000443067 918 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 AL591846.1-201ENST00000451736 433 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 AC243562.2-201ENST00000561247 970 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 AC009486.1-201ENST00000569860 813 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.38■■□□□ 1.01
ABCA3Q99758 AC016629.1-201ENST00000596579 586 ntBASIC21.38■■□□□ 1.01
ABCA3Q99758 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.38■■□□□ 1.01
ABCA3Q99758 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ABCA3Q99758 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.38■■□□□ 1.01
ABCA3Q99758 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.37■■□□□ 1.01
ABCA3Q99758 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.37■■□□□ 1.01
ABCA3Q99758 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
ABCA3Q99758 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC21.37■■□□□ 1.01
ABCA3Q99758 AC136604.1-201ENST00000418535 575 ntBASIC21.37■■□□□ 1.01
ABCA3Q99758 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
ABCA3Q99758 AC015910.1-201ENST00000579400 975 ntBASIC21.37■■□□□ 1.01
ABCA3Q99758 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC21.37■■□□□ 1.01
ABCA3Q99758 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
ABCA3Q99758 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.37■■□□□ 1.01
ABCA3Q99758 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
ABCA3Q99758 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ABCA3Q99758 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ABCA3Q99758 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 AC018735.1-201ENST00000437208 1502 ntBASIC21.36■■□□□ 1.01
ABCA3Q99758 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ABCA3Q99758 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ABCA3Q99758 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC21.36■■□□□ 1.01
ABCA3Q99758 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.36■■□□□ 1.01
ABCA3Q99758 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC21.36■■□□□ 1.01
ABCA3Q99758 AL022328.3-201ENST00000607943 679 ntBASIC21.36■■□□□ 1.01
ABCA3Q99758 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
ABCA3Q99758 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.36■■□□□ 1.01
ABCA3Q99758 KRT8P19-201ENST00000551916 1455 ntBASIC21.36■■□□□ 1.01
ABCA3Q99758 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.36■■□□□ 1.01
ABCA3Q99758 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.36■■□□□ 1.01
ABCA3Q99758 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ABCA3Q99758 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ABCA3Q99758 HINT2P1-201ENST00000419438 481 ntBASIC21.35■■□□□ 1.01
ABCA3Q99758 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.35■■□□□ 1.01
ABCA3Q99758 EIF4HP1-201ENST00000453115 687 ntBASIC21.35■■□□□ 1.01
ABCA3Q99758 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms