Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 KRT18P64-201ENST00000434946 1219 ntBASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 AC008735.3-201ENST00000596646 500 ntBASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 AC106820.2-201ENST00000563775 3264 ntBASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 RRP7BP-205ENST00000566851 833 ntBASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 ACA64.2-201ENST00000459014 129 ntBASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 AL358472.5-202ENST00000641448 1267 ntBASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 AC134407.2-201ENST00000625089 1978 ntBASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP2Q96SN8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 U91328.1-201ENST00000437528 223 ntBASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 RPSAP52-203ENST00000622976 1023 ntBASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 TOMM22P5-201ENST00000416399 439 ntBASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 SNX29P1-201ENST00000548357 1007 ntBASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 AC243562.2-201ENST00000561247 970 ntBASIC19.03■□□□□ 0.64
CDK5RAP2Q96SN8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms