Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 AC004817.3-201ENST00000602957 2129 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 AL031133.1-201ENST00000406807 723 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SPDYE13P-201ENST00000445314 798 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 AC087388.1-201ENST00000571370 1112 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 FAM45BP-202ENST00000592932 1624 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 SIGLEC16-201ENST00000599858 1437 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AL136038.3-201ENST00000561909 1096 ntBASIC13.38□□□□□ -0.27
RAB40CQ96S21 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 MIR4492-201ENST00000581627 80 ntBASIC13.38□□□□□ -0.27
RAB40CQ96S21 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AL121956.5-201ENST00000625261 221 ntBASIC13.38□□□□□ -0.27
RAB40CQ96S21 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 PPT1-215ENST00000641471 2368 ntBASIC13.38□□□□□ -0.27
RAB40CQ96S21 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB40CQ96S21 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB40CQ96S21 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 AC016027.1-202ENST00000607927 1699 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms