Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 YBX2P1-201ENST00000394192 760 ntBASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AL671277.1-201ENST00000429656 993 ntBASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 ADH5P3-201ENST00000433842 1137 ntBASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AL138918.1-201ENST00000568306 659 ntBASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AKAP8P1-201ENST00000434743 1349 ntBASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.92■□□□□ 0.3
CSPG4P5Q96PW8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AC024909.3-201ENST00000611513 2257 ntBASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AL135744.1-201ENST00000565098 629 ntBASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 C20orf181-201ENST00000623918 480 ntBASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AL603832.2-201ENST00000566195 2125 ntBASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 AL589702.1-201ENST00000641229 1509 ntBASIC16.91■□□□□ 0.3
CSPG4P5Q96PW8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSPG4P5Q96PW8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms