Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 AL596275.1-201ENST00000423464 877 ntBASIC14.18□□□□□ -0.14
CMTM3Q96MX0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 AC007326.2-201ENST00000624224 7579 ntBASIC14.18□□□□□ -0.14
CMTM3Q96MX0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 KRT18P38-201ENST00000449496 1282 ntBASIC14.17□□□□□ -0.14
CMTM3Q96MX0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 AC139887.4-201ENST00000607877 719 ntBASIC14.17□□□□□ -0.14
CMTM3Q96MX0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 AC138035.3-201ENST00000622706 2791 ntBASIC14.17□□□□□ -0.14
CMTM3Q96MX0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMTM3Q96MX0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms