Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 AL365203.3-201ENST00000609742 2057 ntBASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.02■□□□□ 0.15
RHBDF1Q96CC6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AL603832.2-201ENST00000566195 2125 ntBASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AC024909.3-201ENST00000611513 2257 ntBASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 PDPK2P-202ENST00000562415 1191 ntBASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AL078644.1-201ENST00000609881 752 ntBASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AC027601.4-201ENST00000611259 610 ntBASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 U82695.1-201ENST00000635752 1889 ntBASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.01■□□□□ 0.15
RHBDF1Q96CC6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms