Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.86■□□□□ 0.13
VPS33AQ96AX1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 PMS2P1-201ENST00000431037 1228 ntBASIC15.86■□□□□ 0.13
VPS33AQ96AX1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 AL732292.2-201ENST00000609649 430 ntBASIC15.86■□□□□ 0.13
VPS33AQ96AX1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 PI4KAP1-204ENST00000612579 1703 ntBASIC15.85■□□□□ 0.13
VPS33AQ96AX1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 PTCHD3P3-201ENST00000403073 906 ntBASIC15.85■□□□□ 0.13
VPS33AQ96AX1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 FOSL1P1-201ENST00000511041 816 ntBASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 CYP2A7P1-201ENST00000595391 815 ntBASIC15.85■□□□□ 0.13
VPS33AQ96AX1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 AP005117.1-202ENST00000581724 1908 ntBASIC15.85■□□□□ 0.13
VPS33AQ96AX1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS33AQ96AX1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 AC126177.1-201ENST00000547829 2218 ntBASIC15.84■□□□□ 0.13
VPS33AQ96AX1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms