Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 PPT1-215ENST00000641471 2368 ntBASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 AC023824.1-201ENST00000562945 2975 ntBASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TSPY19P-201ENST00000418461 509 ntBASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 DUSP5P1-201ENST00000441325 1139 ntBASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TSPY18P-201ENST00000441642 509 ntBASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 AC008677.1-201ENST00000519230 1561 ntBASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC44A1Q8WWI5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 HCG4P8-203ENST00000443049 980 ntBASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 AL160237.2-201ENST00000556165 472 ntBASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 AC008667.4-201ENST00000607370 168 ntBASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 AC012569.1-201ENST00000591191 1524 ntBASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SLC44A1Q8WWI5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms