Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 AC067863.1-201ENST00000494933 530 ntBASIC19.29■□□□□ 0.68
STAG1Q8WVM7 RNA5SP410-201ENST00000516285 106 ntBASIC19.29■□□□□ 0.68
STAG1Q8WVM7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 AL365330.1-201ENST00000607459 531 ntBASIC19.29■□□□□ 0.68
STAG1Q8WVM7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 MIR4321-201ENST00000592276 80 ntBASIC19.28■□□□□ 0.68
STAG1Q8WVM7 AC018529.1-201ENST00000613063 361 ntBASIC19.28■□□□□ 0.68
STAG1Q8WVM7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 AC092364.2-201ENST00000596710 2692 ntBASIC19.28■□□□□ 0.68
STAG1Q8WVM7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
STAG1Q8WVM7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 CNN2P2-201ENST00000443536 909 ntBASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 CNN2P3-201ENST00000450201 906 ntBASIC19.27■□□□□ 0.68
STAG1Q8WVM7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AC024267.1-201ENST00000582320 895 ntBASIC19.27■□□□□ 0.68
STAG1Q8WVM7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AL136317.3-201ENST00000618497 906 ntBASIC19.27■□□□□ 0.68
STAG1Q8WVM7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 AC006449.6-201ENST00000612330 2296 ntBASIC19.27■□□□□ 0.68
STAG1Q8WVM7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.27■□□□□ 0.68
STAG1Q8WVM7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
STAG1Q8WVM7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
STAG1Q8WVM7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
STAG1Q8WVM7 AC008677.1-201ENST00000519230 1561 ntBASIC19.27■□□□□ 0.67
STAG1Q8WVM7 MTHFR-217ENST00000641820 1569 ntBASIC19.27■□□□□ 0.67
STAG1Q8WVM7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.27■□□□□ 0.67
STAG1Q8WVM7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
STAG1Q8WVM7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 AC006449.5-201ENST00000610658 2098 ntBASIC19.26■□□□□ 0.67
STAG1Q8WVM7 AL662844.4-201ENST00000606367 2838 ntBASIC19.26■□□□□ 0.67
STAG1Q8WVM7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
STAG1Q8WVM7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms