Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 AZGP1P1-201ENST00000411909 902 ntBASIC19.7■□□□□ 0.74
SNED1Q8TER0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 CSF2RBP1-201ENST00000447905 391 ntBASIC19.7■□□□□ 0.74
SNED1Q8TER0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 AC036164.1-201ENST00000570544 333 ntBASIC19.7■□□□□ 0.74
SNED1Q8TER0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 U82695.1-201ENST00000635752 1889 ntBASIC19.7■□□□□ 0.74
SNED1Q8TER0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.7■□□□□ 0.74
SNED1Q8TER0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNED1Q8TER0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 AC004945.1-201ENST00000416738 983 ntBASIC19.69■□□□□ 0.74
SNED1Q8TER0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 AP002490.2-201ENST00000524791 560 ntBASIC19.69■□□□□ 0.74
SNED1Q8TER0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNED1Q8TER0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.69■□□□□ 0.74
SNED1Q8TER0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AP001094.4-201ENST00000579008 2176 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AC005229.1-201ENST00000392885 409 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 KLF2P4-201ENST00000451959 1225 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AC104596.2-201ENST00000512793 793 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AP000812.2-201ENST00000538934 718 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms