Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 PMPCAP1-201ENST00000508114 1576 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AL137013.1-201ENST00000432946 1228 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AC005363.2-201ENST00000618631 242 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 AC067930.6-201ENST00000623257 4947 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AC020658.6-201ENST00000623564 1870 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.07■□□□□ 0
CNIH3Q8TBE1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 AC068587.6-202ENST00000641839 5619 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 AC113347.1-201ENST00000413321 391 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 TSPY22P-201ENST00000427496 604 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 BX664615.1-201ENST00000443558 458 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 AC091607.1-201ENST00000490318 1060 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 AC012306.2-201ENST00000609350 630 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 IGHV3-41-201ENST00000613121 348 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.06■□□□□ 0
CNIH3Q8TBE1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms